GTGGCTCTTC CTCGGTTACC TGAACTCAGC AAAGAAATGG TTATTTGATG AAGTATCAAC GGCTGACCCA CAGTAAAAAC AGACAAATTC TAAAAATTAA AAAAAAAAAA AAAAAAGCAT AATTACCAAA AAAAGTCAAT GCTTCCTCCC TCTGCAATTT GCTTCTTAAA CTTTTTTTTT TTTTAAAGTT TTTGAAAAAA W TTTTTTTTAA ATCCTGAAAA GTAGACAGAA AAACAGCTCC TGGAAGAATT TACAACCAAC TGCATGAGAG TCTGGGAAGC CAAGGGGCTA AAAAGCAGAG TAGGGAGGGG CAGACAGGCA AGGCTCCTCC CCAGTCACTG TGGCCTCACA AGGGAGGCTT CTTTAGCTAA GAAGGCAGGG GAGGAGGAAG TGGAGGGACA W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss322122402 | CHEV_7_26506849 | CHEVERUD | SCREENING_POP | f | SNP | T | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs239222610 | SNP | T | A |
Location: Chr7:25421255 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Hnrnpul1 | heterogeneous nuclear ribonucleoprotein U-like 1 | within coordinates | ||||||
Rr155556 | regulatory region 155556 | 1255 bp distal | ||||||
Rr155557 | regulatory region 155557 | 1546 bp proximal | ||||||
Rr160908 | regulatory region 160908 | 1146 bp proximal | ||||||
Rr170211 | regulatory region 170211 | within coordinates | ||||||
Tssr65169 | transcription start site region 65169 | 1055 bp upstream | ||||||
Tssr71293 | transcription start site region 71293 | 102 bp upstream | ||||||
Tssr71294 | transcription start site region 71294 | 1026 bp downstream | ||||||
Tssr71295 | transcription start site region 71295 | 1095 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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