rs239241834 SNP Detail

Summary

• ID
  rs239241834
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102560011 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAAAGGGT GACAAAGCTT
  TCATACCAGG CGAAGGAGGG TTGAAAACAT TTTTTAAATT ATATTTATTT ATTGTGGGTG
  GATGGATGTC TACACATGCG TGTGGATGTC AGGTGACAAC TTGTAGTAGT TGATTCTCTC
  CTTCTTCCAT GTAGGTTCCA GACATCAAAT GCAGGTTGTC GATCTTGAAA GAAAGCCCAT
  K
  TATCAACTGA GCCGACTCAC CAGCACATTA AAATCTTTTT CTAATTTCTA GTTATGTAGT
  GTATAATTCA TTTTCTGTTT ATGGTTAAAA TTGGGTTTTT TTTGTTTATC TGTTTATTGT
  TCTCTTAGTT TTATGTTTTC TTTCTCAAAT TGGAGGTGAA GGAGGAGGAA GAGGAGGAGG
  AGAGAGAAAA AATAGGAAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323158833	CHEV_9_102585142	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239241834					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102560011 () rs orientation: forward

Symbol	Name	Function Class
Gm46150	predicted gene, 46150	within coordinates
Rr192177	regulatory region 192177	1811 bp distal
Rr207053	regulatory region 207053	611 bp distal