rs239256367 SNP Detail

Summary

• ID
  rs239256367
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:126387994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTAAGTAAC CCCAATAAGC
  TTCCTGGTTT AGTGAGCTAG ACTTGGGTGC AGTCACTTTT TGGCCTTTTG TGGGTGCCCT
  GCCACTTGTT CTAATGTGTG AATCAAATTC ATTATTGCCC TTTTATGGAT ATTTCTACTC
  TGGTTCTGTA GGTGAAAAAA AAATGGAGGC ACAGAAAGAC ATCCCATTAG TGAGGTGGGG
  W
  ACTGAATTTA GACTTGGGCT TTACAGCCAG TGATGAGGTA GGTTTTGAAC CTCCGTACCC
  CCAACAGCCT CCATCTGCTG CTGATGCCCT TCACTGGCTA CCACTGGCAA ACATCACCAT
  GTGAGACACA GCACATTTTC CCCCCACAGA GACTCCTATG AGTCTTAAAA GAGGGTCTTT
  GGGGGGAGGG GGAGGACTCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322860909	CHEV_8_128185155	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239256367					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:126387994 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd620e	DNA segment, Chr 8, ERATO Doi 620, expressed	289 bp proximal
Gm30871	predicted gene, 30871	within coordinates
Rr180110	regulatory region 180110	1794 bp distal
Rr180111	regulatory region 180111	1207 bp proximal
Rr183380	regulatory region 183380	427 bp distal