rs239330392 SNP Detail

Summary

• ID
  rs239330392
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:4110962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTACGTAG ATTGAATACA TTAGAGAAAA
  CAATTCCTGA AACATTTTGT CGGGCCTTTG ATGAATTGAG TCTGATTGGT CCCTGGGCTC
  ACAGGGCAGA AGAGAAAAGG TACACACAGG ACTTCCTTAG ATATTCAGAT CACACACAAA
  M
  ACATGctctc tctctctctc tctctctctc tctcATGTGC ATGTGCACAA ATAACAAAAA
  TAGAAAAATT AGAAAAATTT TATAACTCAT CTTCATTCTT GTTATTGTCT TTGTTGGTAA
  GATGAATCAG ATCCAGGTAG TATTTAAAGC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324212513	CHEV_13_4060208	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239330392					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:4110962 () rs orientation: forward

Symbol	Name	Function Class
Akr1c14	aldo-keto reductase family 1, member C14	within coordinates
Rr474441	regulatory region 474441	1361 bp distal
Tssr118214	transcription start site region 118214	1376 bp downstream
Tssr118215	transcription start site region 118215	1362 bp downstream
Tssr118216	transcription start site region 118216	1290 bp downstream