rs239334031 SNP Detail

Summary

• ID
  rs239334031
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:107463355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTAAAATG TTTGTGAATG TCATTTTTTA
  ATACTGGAAG AAAAGTATTC TATTGTGTCT GATGTGTTTA GGATGTCCTT TATGGAGCTA
  ATTAAAAGAT GAAACCTGAA CACACACACA CACACaaaaa aaaaaaaaaa aacaaaaaaC
  Y
  GAATGGGTAG TTTAATCAGG AGAATCAACA GAACCCTGAA ATGAAGATAG ACTATGTTTA
  AGGCAATAGT GTTAACAAGA AATATCCTAA TATATTTTTA TGAATTATTG AACTGACAAC
  TTAGTTAATA AAACCATAAT ATAAATTTAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322381995	CHEV_7_115007662	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239334031					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:107463355 () rs orientation: forward

Symbol	Name	Function Class
Gm10156	predicted gene 10156	648 bp downstream
Rr652939	regulatory region 652939	1236 bp distal
Tssr68454	transcription start site region 68454	1181 bp downstream