rs239432020 SNP Detail

Summary

• ID
  rs239432020
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:163307926 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACCCAGAC CTCAGGATCC
  AATGACAGAA TAAAGCAGGC TGAGCGATAT CTGTACTTAG GACGAAGCAC TTAGGTGAAC
  CATCTTGAGA AACTTCAGCT CTAAAGTCCC TTCTATGAAA GGATGAGACA TCGGGCTGAG
  TCTGGGCAGG TCGGATGGCT CAGTGGGTAA AAGCACGAAC TGGCAAGCCT CAGGGACAAG
  R
  CTTGATCCCC AGGATCCAAT GACAGGGGAG AGCCAACTCC ACGAAGCTGT CCTTGTGGCA
  TATGTGTACA AACACATGCA CATTACACAC AATAATAATA AAGATTTAAA ACTAAGGTGA
  ACAAGATAGC TCCCCGGCAA AGGCGCTTGC TGCCAAGCCT GGCTACCTGA GTTTGACCTG
  AAAGTCCTAT ATGGTAGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320603307	CHEV_2_163291742	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239432020					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163307926 () rs orientation: forward

Symbol	Name	Function Class
Rr374196	regulatory region 374196	773 bp downstream
Rr569383	regulatory region 569383	1693 bp distal
Rr569384	regulatory region 569384	1060 bp distal
Rr569385	regulatory region 569385	700 bp proximal