rs239494038 SNP Detail

Summary

• ID
  rs239494038
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:63084552 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAGAATTT AGTATCATTA
  AGGATTAGTT ACTCAGCCAG GTGAGGTGGC TCACGCAGGC GGATTTCTGA GTTCGAGGCC
  AGCCTGGTCT ACAAAGTGAG TTCCAGGACA GCCAGGGCTA TACAGAGAAA CCTTGTCTCG
  GAAAAAAAAA AAAAAGGATT AGTTACTCAA GTCACGTGGC TTACTGTAGG AGTTGGCCTT
  R
  CTGTTTAGTA GTTCGGACCT GTAACCTGTT GGGAAAGTTT TCCATTCTGG ATATTTTAGG
  AATCATATAA ACACTTTCTG ACACCCTTTT ATTATACTAA GAGTGTGGGT TAAGTCCATG
  TCCATCTCTG GTCTCTTACA TAGGTATGAA CCTCTAGCTG GCCTTGAACT TGCTATATAG
  ACTAGGCTTG CCTCCAATTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323333185	CHEV_10_62711521	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239494038					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:63084552 () rs orientation: forward

Symbol	Name	Function Class
Gm66860	predicted gene, 66860	within coordinates
Herc4	hect domain and RLD 4	within coordinates
Rr432770	regulatory region 432770	951 bp distal