rs239523606 SNP Detail

Summary

• ID
  rs239523606
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:97447053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCAGAGAG AAGTAATAAG
  AGAATCAAGA TTAGTAATTT TGAATGAGAG CCTAGTAATA AAATAACTAA AGATAATTAA
  AGATCTGCCT ATTGATGTAC TTCTGCACTA TATTTTAGGT TTTTTTTTTT AAAGAAAGGG
  ATAAATATTA CCATATTCAT TTTTATAAAC ATACATATCA ATCATTACTG TCAACTGCTG
  R
  ACTAGAAGAT AACTCTGGTT AGCTTAAACT CAAAAAGTAG CTATTAAATG TTGGAAAGGT
  GATCCCAGAA AATAGATCCA AAGAGAGGCC GTAGCAGAGA CAGTCACCAA AACCAAGTAG
  ACCATTTGTC TCTGTTCAAA ACCCAGGAGC CTTGGGTTGT GGATAACATC CTACTTTCTA
  TTGGACATTA CAAAAGGGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324130801	CHEV_12_98719004	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239523606					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:97447053 () rs orientation: forward

Symbol	Name	Function Class
Rr387670	regulatory region 387670	169 bp downstream