rs239640874 SNP Detail

Summary

• ID
  rs239640874
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126839143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTATTGAGG AAGCTTGTTG
  GATCTGCAAT GAAAGGAGTT AGGTTGGCAT TATTCACCAC AACAGAGACC ACCTTGTTTG
  TTTGTTTGTT GTTTTGTTTT TCGAGACAGG GTTTCTCTGT ATAGACCTGG CTGTCCTGGA
  ACTCACTTTG TAGACCATGC TGGCCTCAAA CTCAGAAATC CGCCTGCCTC TGCCTCCCGA
  R
  TGCTGGGATT AAAGGTGTGC GCCAACACGC CCGGCATCAG AGACTACCTT AATACTGCCA
  TCTGTAAGCC TGTCTCCTAA GCACTCCTCC TACCAAAGGC CACTTTATAA CATTGTCTTC
  TTGTGTCCCT CTTCCCTGAG AGAGTATCTT AAGATCAACT TAACAACAGG CTTTGTAACA
  CTGTATTCTT GTGGGTCATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320498730	CHEV_2_126822959	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239640874					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126839143 () rs orientation: forward

Symbol	Name	Function Class
Rr564431	regulatory region 564431	129 bp distal