rs239651911 SNP Detail

Summary

• ID
  rs239651911
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3669775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACAAGACAC CTGTTTATTT CTCCTTTCAC
  CCCAGCACCT CTAGCTCTTT GGCATCTGCT GGAAAAGGCC GAACTTGGCT TAGGGTAACC
  ATGACGCCTG TGCTTTGAGA GCTGGTCTTT CTCCCTCCTG CCTCTGGTGA AGCCTAAGAA
  R
  GGTTGTTCTA GGGACTTCTG AATAGCCTGA GTTAGCTGCC CTTGGAACTA GGAGGAAGTG
  GTCCCCTAGC AACAGCAGCC TCTGAAAGCC TCTTAGCCCA GTACTTCTCT GGCTTTTTGT
  TCCTGCTCCT GCATGTTGCC TCTCAGCAAC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320204859	CHEV_2_3586010	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239651911					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3669775 () rs orientation: forward

Symbol	Name	Function Class
Gm50615	predicted gene, 50615	within coordinates
Rr372694	regulatory region 372694	691 bp upstream
Rr550927	regulatory region 550927	within coordinates