rs239662305 SNP Detail

Summary

• ID
  rs239662305
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:9909131 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGAGCAGA TGATTATATC
  TGGGTACTCT GATGAGGAAA CATCGTTTAT GAAAAAAATA ATTTATCATT GATGAGAAAA
  TAATTTTGAG GGGGTGGGGG TTAAGCCTAC CATCTCAAGC ATATTTCCTA TAGGAAATCC
  ACCGACCAAA TATAGATTGA AGATACCGGA GGGTGGAGTA AGAACCTGGA TATGTAGACA
  R
  GAGGCTCAAA GGTATGATCA GCTCCATAAT ACATATGATA CAGCAAGAGA CACTCAGAGA
  GACATTGACA GGTACTATCA GCCTCAGTGT CTTTCTACCA GGGTCATTAC CATTTGGAGG
  TCATTTCCTG GCTTCTGAAG CCCACTGATG AGGAGTTTCC AGGTGGGAAG ACAGCAGCTT
  CTCTGTGGAA AGGGGACCCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325294952	CHEV_17_9883067	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239662305					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:9909131 () rs orientation: forward

Symbol	Name	Function Class
D17Mit97	DNA segment, Chr 17, Massachusetts Institute of Technology 97	1380 bp distal
Rr392258	regulatory region 392258	342 bp upstream