rs239707812 SNP Detail

Summary

• ID
  rs239707812
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13264526 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTGGGACT GAACCATTGA
  AGTAGCCCTC AGCAAAATGG AGCCAAAACC CCTCTGCACA AAGGCAGGTT GCTGCCTGTA
  GCCCTCTGCG CTTGTATGGG AAGTGTCTCA ACGCCACCAC GCCCGGCTAT CTCAACGCTT
  TCTTAGCAGG AGTCTGCACA CGGATTTTCT AGCAGGCTAC TACTCTGAGT TAATTAGTGA
  Y
  GATGCGCTTT TGGATGCATG GAGCAAGTTC CATGCCTGGC AGTGGTGGAG CATGTGCATG
  CTTTTAATCC TAGCACTCAG GAGGCAGAGG CGGAGGTGGA GGCAGGAGGA TATCTGTGAG
  TTCAAGGCCA GCCTGGTCCA CAGAGTGAGT TTCAGGACAG CCAGGGCTAC ATAGAGAAAT
  TCTGTCTCAA CCAATAACTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505140	CHEV_8_13214526	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239707812					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13264526 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	446 bp upstream
Rr368495	regulatory region 368495	690 bp downstream
Rr368496	regulatory region 368496	353 bp downstream
Rr659886	regulatory region 659886	1021 bp distal
Rr659887	regulatory region 659887	1063 bp distal
Rr659888	regulatory region 659888	3 bp distal
Rr659889	regulatory region 659889	402 bp distal
Rr659890	regulatory region 659890	1945 bp proximal