rs239721039 SNP Detail

Summary

• ID
  rs239721039
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26350544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCAGGCACT TGGAGCCAGG CAGGTGAGGT
  AAGCCAGGCg ggtggacaga tgggtggaag aatgggtgga cagGTGTATG TAGGTGGTCC
  TTGTAGCCCA TTGTTCTTGT GGTTGTGGCC CTGCCCTCAG CCCACCCCAC CCTCAGCACA
  Y
  ACACACTCTC CCACCGAACC TTCACTTTGG ATCCTTACCC CACATCGTCC ATGGAAGGGT
  CAAGGGAAGA GACAAAAGAA AGTCTATGAG CAGAATGGAG CCACACCACA TCACCACGGG
  CCCGAAAACT GCCTTGGTTG GTCTCTCACG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325340013	CHEV_17_26268515	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239721039					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26350544 () rs orientation: forward

Symbol	Name	Function Class
Tssr143212	transcription start site region 143212	243 bp downstream