rs239721671 SNP Detail

Summary

• ID
  rs239721671
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17768381 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTGCTACA TTCTCACTTT
  GAATAGTTTA CTTATACTAG GCCCCATCCA AATTATATGT AAATATCCAG TCTTTTCTTC
  TATATCTCCA CAATTAAATA AGATAAAAAA CCAAGATAAC TGAATTCATT TTAAAATCAT
  GGCTACTAGT ATCAAATGTG GTTCTAGTCT TACTTCCTAG CAATACTGCT ACAGGCTATT
  M
  CTCTATTCCT TGAGGACAAG TTATTTCTTT TTGTCCTCAA GCCTCCATCA TATTCATTTT
  TCTCATAGTG GTGAAGTCCC TTACTCGCTG ATTAAGCAGC AGGAAATAGA ACACTTTCAC
  AATCCACTTC CCCTCACCTG GTCTACTTCA TTCAGCTTTT CAGTCATAGT GTTTCATCTC
  AATAATAGAA ACCATAACTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320673563	CHEV_3_17614217	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239721671					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17768381 () rs orientation: forward

Symbol	Name	Function Class
Gm56811	predicted gene, 56811	within coordinates
Tssr32670	transcription start site region 32670	431 bp downstream