rs239812732 SNP Detail

Summary

• ID
  rs239812732
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61901661 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTATGACT GTTGCTGGGC TTGGGGAGCA
  CAGTGAGCCA GGTAGACAGG GCTAATGTCA TCTTCTGGAA GGGATGACAG ACAGGAAAGA
  AATAGTGGTC ATAACTGTGT GAAGGTCCCT GAAGGTCCCA tgtgcgtgta tgcgtgcgtg
  Y
  gtgcgtgcgt gcgtgcgtgc gtgcgtgcgt gcgtgtgtgt gtgtgtgtgt gtgtgtgtgt
  gtgtgtgtgA TAAAGGGACT CAGGCACATA TCTCAACCTA GTCTCAGGAG GTAAATGAGG
  CTCAGGAAGC CTCAGTCAGA GTAGCAGACT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330706	CHEV_10_61528630	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239812732					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61901661 () rs orientation: forward

Symbol	Name	Function Class
D10Mit149	DNA segment, Chr 10, Massachusetts Institute of Technology 149	1246 bp proximal
Tssr93687	transcription start site region 93687	733 bp upstream