rs239843808 SNP Detail

Summary

• ID
  rs239843808
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:63417303 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CGAGAGAGT AATTTTACCC CAAACAATGG
  GACTTTATTC ATTAATAAGA GTTTTTCATT TATTATTCAT TAACAATAAT TTGATATAGA
  AATGCAGGAA TGATGAACTT AGCACTGTGT GCTCAACCAG GCATTTGTTC AGTATTTGAA
  M
  TCTGAAGTTC CTGAGCCCAC TGTTGTTTTG CACGTTTCTG TTTCTTTTTT ATTTTAGGAA
  TTTAGCCACC AGAGTTTTTT GGGTCTTAGT TTCTGTGTCT GGTCCCAAAG GGGACAATAT
  CTCATGGGGG AAGTGGAGTG AATTCAAGTT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319743363	CHEV_1_63424718	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239843808					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:63417303 () rs orientation: forward

Symbol	Name	Function Class
Gm71047	predicted gene, 71047	within coordinates