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rs239876026 SNP Detail
Summary
  • ID
    rs239876026
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr2:138943205 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      TAAAACCAG AGTTATTTAT AGACATTAAA
    AAATCTTATT TAAGATCATT CTTCTTAATT aaggcacatt caaataaaaa tgagaaatca
    tttttcttta tcagagagta aattatccaa gtaattaata atttatggta ttattaacaa
    Y
    ttattaaagt aaccagtctc ctgtattttt agtgagagtt taggttgtta caaacttaga
    gctatcaaaa gaataaataa aaacatgtat cacaaaataa gatgtgcatg aaccttaagc
    ctaagaattc tcttctagga atttgtgtta                                 
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss320526175 CHEV_2_138927021 CHEVERUD SCREENING_POP f SNP T C
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs239876026 SNP T C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr2:138943205 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr566007 regulatory region 566007 1544 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory