rs239886187 SNP Detail

Summary

• ID
  rs239886187
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:67608023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGACAGG TGCTATCTGA
  GCACCAGAAA TGAACGCCTT TCAGTAGTAC TAAGTATGTA ATACTTCCAC ACGTGCTGTG
  GCCACGGCGG CTCTTGGCTT CTCCGTCTGA GACGCCCGAT GCACGTGAAA GACAGCAAAC
  AGGCTGTACG GTGTGATGAT GCACTCGGAG CTTCCTGTAA GTAGTGTTTG GCAGCAGGTC
  Y
  GCAAGAGGAA GTTTCCAAGT TCCTTATAAA GACGTGTTAT TTGGGACGGG CGCAGTCCTA
  GTGTTCGGTG ACGCTGAGAT CTGTGGACAT TGGGGAGTGC GTGGCTGATG TCCAGGATTG
  GTAAAGATTA AAGATTAGAA TGTGTACAGG TGCCTTGTCT CGATCCCCTC ACCCCCTGGG
  TCTGACTTGT TCAGAGAAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322244746	CHEV_7_75103161	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239886187					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:67608023 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19234	CpG island 19234	within coordinates
Igf1r	insulin-like growth factor I receptor	within coordinates
Tssr67104	transcription start site region 67104	51 bp upstream