rs239890654 SNP Detail

Summary

• ID
  rs239890654
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:74315876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTG AGCTATGCCT AAGTTGGGAA
  Y
  ACTGCAGATG GCCAGGCAGG CTGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324434874	CHEV_13_74305205	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239890654					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:74315876 () rs orientation: forward

Symbol	Name	Function Class
Cpgi5860	CpG island 5860	569 bp distal
Exoc3	exocyst complex component 3	1731 bp downstream
Rr284943	regulatory region 284943	925 bp proximal
Slc9a3	solute carrier family 9 (sodium/hydrogen exchanger), member 3	within coordinates