rs239893365 SNP Detail

Summary

• ID
  rs239893365
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:10375719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCAAGTAT GTGACCCAGT
  GACTTTGTGA TTTAACTGCA CTCAGTCATT CCTAACCTTT CAATTCCCAT GCAAATTATA
  ATTATCTTAC CTGGGTCCGC TGTTTTTATG ACTTCTTACA GACAGATGCA CTACCTACGA
  GTGGGAAATG TAGGCACAGC CTGCGTGCTA GGGGTAGGGC TCAGAAGAAA AAGAGCCACT
  R
  TGGTGTATAG GTGTCTTTAT AATCATGAAA GACTTATGGA GAGTTGACTG GTTTGAGCGG
  GTGGAGTGAT GGCCGAAGTG TCCAGGAAGT GCTGTTATGT GTGGCTGTGG AGTGTGAAGG
  GAATTTCCAT GGACGTGTGC CAATGACAGC TGGAAAGTAG ACTTTGGGAA ACGTAACGAT
  GGAATAAACT GGTTCTAGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320653400	CHEV_3_10310659	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239893365					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10375719 () rs orientation: forward

Symbol	Name	Function Class
Gm38364	predicted gene, 38364	1433 bp downstream
Impa1	inositol (myo)-1(or 4)-monophosphatase 1	1297 bp downstream