rs239959495 SNP Detail

Summary

• ID
  rs239959495
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13822667 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTTAAGC CACCTTGTGT
  GTCTTGGGAA TCGCTGAGCC AATTCTCTAA ACCCATAGAA CTTTGGATGT AGATGATACC
  TTAATATAGT TCCTCCTCAA AATATGCAGT CACTTTCTCT ACAAAAGTCA CTTGTTCTCT
  AAAACCAATA CTCAAGTGAT TTTAATCTTC AGACATGTAG ATACGAAAAA AGCCTGAGTC
  M
  ACTGAACTCA GCTGAACCAT TCCTGGCTAA TCTCGTACCA AAGTGTGCCC AGTCTTCTAA
  TAGTCTTTTG AGTGCTGTGG TTTTTCACAG CCTATGTACT TTGTTAGTAA CTTTACTGTC
  TAAAATAATT TCCAAACTCA CTGCTGCCTC TTGTGTACTA TAAGTAGCCA TCGTGTGCCT
  CCAAGGGAAT GTGTGCAGTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322509749	CHEV_8_13772667	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239959495					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13822667 () rs orientation: forward

Symbol	Name	Function Class
Cdc16	CDC16 cell division cycle 16	within coordinates
Gm46032	predicted gene, 46032	within coordinates
Tssr76425	transcription start site region 76425	1278 bp downstream