rs239967130 SNP Detail

Summary

• ID
  rs239967130
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:69469695 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAACATCT TAGAATTGAG CTGTCTCTGC
  AGGAAGAATA CTAAATTTTC CAAATAAATT CCCACACTAT GTGAAATATT TGATTAGTGC
  ATCTTATTTG ACATGAATCC TGCCTCCACT Cttcccctct gtctcctccc cttccccctt
  Y
  ttcccttcct ctcccctttc ccttctcttc ccttccttcc ctcctttccc ttccctctct
  ttcaactccc ctcccttctc tctgttcctg cttctcttct cccctattta attctattgt
  ttattgagat agCAAATAAC ATTACAGTTT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319781365	CHEV_1_69477110	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239967130					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:69469695 () rs orientation: forward

Symbol	Name	Function Class
Gm28497	predicted gene 28497	690 bp upstream
Gm69966	predicted gene, 69966	within coordinates