rs239974514 SNP Detail

Summary

• ID
  rs239974514
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:121070618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCATCTGAG AGGAGGGAAC
  ATCAATTAAG AAAATGCCTC CACACTGTAA TTGGTAGGGG TGGCCCTAGC CTACAGTGGG
  TGATGCCATC TCTGGACTGG TGGTCATGGG TTCTATAAGA AAATAGACTG AGCAAGACAG
  ACGAGGCAAA CCATGCAGAG CAAACCAGTA AGCAGCACCC ATCCGTGGCC TCTACATCAG
  Y
  TCCTGCCGCC AGGTCCTTCT CCTAAGTCCT GTCCTGATTT TCTACAGTGA TCTGGAAGTG
  TTAAGCTAAA TAAGTCCTTC CTTCCCCAGC TTGCTTTTGG TCATGATATT TCATCACAGC
  AATAGAAACC CTAACTAAAG CAAGTTGGTA TCAAGATGGT AGGGTATAGT AGGGTAGAGC
  TATGACAACC CTGACCATGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324851458	CHEV_14_121232428	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239974514					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:121070618 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6879	CpG island 6879	1055 bp distal
Rr287003	regulatory region 287003	1218 bp distal
Rr287004	regulatory region 287004	983 bp proximal
Rr390218	regulatory region 390218	819 bp downstream
Rr404289	regulatory region 404289	1106 bp downstream