rs240031568 SNP Detail

Summary

• ID
  rs240031568
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:21100383 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAT TTGAGAATGG GAAGCCTATC
  S
  CTGACTAAAC AGCCCCCAGC TTCTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323594003	CHEV_11_21050386	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240031568					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:21100383 () rs orientation: forward

Symbol	Name	Function Class
Peli1	pellino 1	60 bp downstream
Tssr100551	transcription start site region 100551	1549 bp downstream
Tssr100552	transcription start site region 100552	1300 bp downstream
Tssr100553	transcription start site region 100553	1281 bp downstream
Tssr100554	transcription start site region 100554	1170 bp downstream
Tssr100555	transcription start site region 100555	659 bp downstream