rs240039028 SNP Detail

Summary

• ID
  rs240039028
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4294958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTTTTTTT GTTTTATTTT
  GGTTTGGTTT TTCGAGACAG GGTTTCTCTG TGTAGCCCTG GCTGTCCTGG AACTCACTTT
  TGTAGACCAG GCTGGCTTCG AACTCCGAAA TCTGCCTGCC TTTGCCTCCC GAGTGCTGGG
  ATTAAAGGTG TGCGCCACCA CCGCCCGGCT CTACAATCTT TTTTTAAGCT AAAGCGCTGA
  C
  CCTGTTTCAG ACAGTCCATC CTTCACTTCC TGTTTAGATG TGCGGAGACA TACTATATTG
  GCTAACTACA TGCCAAAGAA TCCCTCCCCC CATTAACTTG AGGACCCAAA GGACAAGTTC
  TCAGAGTCTC CAGAAAAGGG GTCTGGGTTC TCTCTTCTCC ACCTTTGACC TCTTGCTCTT
  CTTTTCAATG CTGTATTTAG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873819	CHEV_12_4244958	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240039028					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4294958 () rs orientation: forward

Symbol	Name	Function Class
4921501I09Rik	RIKEN cDNA 4921501I09 gene	within coordinates
Rr260536	regulatory region 260536	358 bp distal
Rr263521	regulatory region 263521	824 bp proximal