rs240124626 SNP Detail

Summary

• ID
  rs240124626
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116514221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTAAATTG CAAGAGAAAT TAGATCTGAA
  AGGAACACAG AAAGAGCCCA AGGAATTGGG ACACCTGGGA GCCATTAGCA GTAATCAAGG
  CTTATCCTGT ATGAAAACTT GGGAGGGAGA TGAGCCCAGC GGAatataca tatatttatg
  Y
  ccatgtaaat tgatatatat gaaaatggta tatgtatcaa tatatacacc atatctgtat
  actccaatat atgtttgcat atatgtctat ttaAGAAAGT GAATTTATAA TTTGCTTTAA
  AAGTCTTGTT TTCTGTGGCA ATTTTTACTT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323490236	CHEV_10_116115372	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240124626					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116514221 () rs orientation: forward

Symbol	Name	Function Class
Gm26579	predicted gene, 26579	within coordinates
Rr385348	regulatory region 385348	337 bp upstream