rs240219906 SNP Detail

Summary

• ID
  rs240219906
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:130093053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTATTCAGC TTCCCTACTC CTAAAAGTAG
  CCTGGCAACT GGAAAAAACC ATAGTGAACA GATGAAGCTA ACACAGGGCT GATCCAGAGG
  AAAGCAGACC TCTAAGCATG CTGAGGGATC AGCAAGGGTG GAAAAAAACA GTGGGAGGTC
  W
  CAGAAGCGCT GGCTAACCTG TGGGTCAGTA TCCCATCAGA AGATCCTAAA CTCTACCAGT
  AAAAAACATG TGGTCATGGT GATTTTAGAC TATGTATTAT GTTAGTAGAA CTGGACACAG
  TGGCTAGAGA CTTGTTTCTC CCCGTGTATA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319971094	CHEV_1_132061893	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240219906					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130093053 () rs orientation: forward

Symbol	Name	Function Class
Thsd7b	thrombospondin, type I, domain containing 7B	within coordinates
Tssr8552	transcription start site region 8552	1482 bp downstream
Tssr8553	transcription start site region 8553	1449 bp downstream