rs240230836 SNP Detail

Summary

• ID
  rs240230836
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116241712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGTAGCAA ATATCGATGT
  CTAAGGTAAT GAACGCAGCC TGGCTGTGTG AGAGCCCATC AGCCTTCACC TGTTATTTAT
  AGCACTGTTG TTTACCCCAC ATCAGCACAG GCATCTCTGA ATTGGAGATG ACTAACAGTT
  TGGGTTGACT TGGTTTAATT AGACTGAATT AATATGGCCA CCGTACAGTT GTGTGGGAGG
  R
  CCATTCATTA ATCATCTAAA CTAGATGTTG ATGTTTCCAA ATGTAAAACA CTCTTCCCCC
  AAATTTGGAC TGAATTTATG CACTCTTATG CCTGCCTCTT TTCCCTCAGA TTCCCACCAG
  AAGCCTGGAG CCCACACAAG CTCCTGAACG CATCTACTAA TGAGCTGAAG GGAAAGGCCC
  ACATTTGAGT TAAAGGTGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320895025	CHEV_3_116150981	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240230836					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116241712 () rs orientation: forward

Symbol	Name	Function Class
Gm22361	predicted gene, 22361	328 bp downstream
Gm66091	predicted gene, 66091	within coordinates