rs240230882 SNP Detail

Summary

• ID
  rs240230882
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:111936873 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATAGGAGA CCTGTGTGGA
  AGGTTCCACG GGAACAGTTT TCTAGACAGA GGTGTGGGGC TAGGGTGTGT TAGGAAGTGG
  TCAGTGTATG TAAAGGTGAG CAGACATGGC TGACAGGGCA GAAATGAGAG GGCAGAATGT
  CTGATATCAC CAGCTTTGGG GTGTGACACT GTGGTGTGGT CACCGCAGTG TGTGAGGACG
  Y
  GCAGAGGGTC TCACACGGCC CTGACAGCAT GTTCTTGAGT TTCATCCTCT GACTAGGCTA
  CAGCGAGCTC CTGAAAGATC CACCCTATAT TCTTGAAGGA TGATTTGGGT AGCAGTACAG
  AAGCTAGCTA GCTCAGAGGG AGCGAGGTAG GGAGCCAGCC CTGACTCAGT GGAGAGTCAA
  CTGTTCTATG AACAAGAGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322412428	CHEV_7_119481180	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240230882					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:111936873 () rs orientation: forward

Symbol	Name	Function Class
Mical2	microtubule associated monooxygenase, calponin and LIM domain containing 2	within coordinates
Tssr68564	transcription start site region 68564	1060 bp downstream