rs240242961 SNP Detail

Summary

• ID
  rs240242961
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107181097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGCAGCA ATCTCTTGGA
  TATGAGACTG ATGGCTGCAG CAATCTCTTG GCACTGTGAT TTTCTCCTGT GCATCATCTG
  GATTATAATC AACCTAAGGA GACAAACAGA TTTTCTTATT CAAATTGACT TTCATAACAC
  ACCAACCTCT CTTACACAAG GTAACCCATG CTATCCTCCC CACACCTGGA TGAACCAGAA
  K
  ACAGTACCCC TATATCAAAG GCTCCCCAGA CACTCAGAGA TCCCATGGGA GGCTGGTGCC
  CTGGCTACCA GGATTCAAAT GTATGCCTCT GACTCCAAGG ACACCCGCAT TTGATATTTA
  ACACTCTCCA CTCTCTAATA ACTCAGCAGG CTTATACATC CTCCTTCCAG CCCTCACCCC
  CTACAAGTGA ACACACACAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320865150	CHEV_3_107076699	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240242961					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107181097 () rs orientation: forward

Symbol	Name	Function Class
Rr582951	regulatory region 582951	within coordinates
Rr582952	regulatory region 582952	242 bp proximal