rs240245014 SNP Detail

Summary

• ID
  rs240245014
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:120970455 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTCCTCCT CCAGCGTCAT
  GTCTGCCTGG ATGTCACCAT GCTCCCACCA TGATGATAAT GGACTGAACC TCTGAATCTG
  TAAGCCAGCC TCAATTAAAT GTTGTTTTTA TAAAGAGTTG CCTTGGTCAT GGTGTCTGTT
  CACAGCAGTA AAACCCTAAC TAAGACAGAG GGCAAGGGCC CAATAGTAGA AACGTACCCT
  K
  AGGAATGGCC ATCATCGCAT TAGTGAAATT AATCTCTAGG TCATGGGGTC CGTGCTATGG
  AACCAGAAAT GGAATAGTGA TCAGTGAAAT GACAGTTTGA CCATGACTTG TGTGATTATG
  AATATCTCAT CCTTAAAAAC CTGTTTTAAT TTTATTTTTA AATTTAAACA CTCATGTTAT
  TTGTCTCCAA GAAAGATTCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321667535	CHEV_5_121282399	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240245014					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:120970455 () rs orientation: forward

Symbol	Name	Function Class
Rr619442	regulatory region 619442	1018 bp distal