rs240254024 SNP Detail

Summary

• ID
  rs240254024
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:139336706 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaggagagg ctggaggagc aggagttcaa
  agccagcatg agctacacaa gaccctgtat caagaCCACC ACCACCATAA CAACAAACAG
  CAAAATTCCT TCCCCAAAAT AACTCCCAAG GTAGCTGAgt ggtgttgcct gcgatcccag
  Y
  cctgggaggc agaagcagga ggatttgggc cacaccagcc agccaTGCAG AAGCATGGAC
  ACTGCGGGGG AAGTTGTCCA GAGATGCCTG GACACCAGAA CACTTAACTC ACCCAGGCAA
  CTCTGGGGTC TTCGCTGAAG CCATGGGGAC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321704286	CHEV_5_139826905	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240254024					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:139336706 () rs orientation: forward

Symbol	Name	Function Class
Cyp2w1	cytochrome P450, family 2, subfamily w, polypeptide 1	1666 bp upstream
Tssr49499	transcription start site region 49499	1656 bp upstream