rs240309208 SNP Detail

Summary

• ID
  rs240309208
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:79164370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAGTTTGCC CCTTTCACAG
  TAGGTGAACA TACTATGTGA ACATAAGAGC CCAGTGTGCA AGCCCAGTGT GCATAGCTGC
  CCACGCCTTT CATTTCAGTA CTCGGGAGGG AGAATCAGGA AGAACTCTGT GAGTTCCAAG
  CCAGCCAGGG GTACCTATGA GACCTTGACT CAATAAAATA AAACTAATAT CAATACTCTA
  A
  TAATATACTG AGCACAATTC AATTTATTTA AGCAAGATCT CACTTTGGAG CCCAACATGT
  ACAAAAAAGA AACAAAAACA AAACCCAGAA ACTGAAAGAG AAGCAGGGGT CTGTTACCTT
  CATTCCACTG AAGAGGAAGA AGTTGAAAAT CAATAAATCT GCATTTTCTT TACCTAAAAC
  CTCTCCCTGG GTTCTAAGGG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323759447	CHEV_11_79087046	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240309208					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:79164370 () rs orientation: forward

Symbol	Name	Function Class
D11Mit94	DNA segment, Chr 11, Massachusetts Institute of Technology 94	1205 bp proximal
Gm44787	predicted gene 44787	within coordinates
Rr241861	regulatory region 241861	830 bp proximal
Rr251784	regulatory region 251784	within coordinates
Tssr109475	transcription start site region 109475	336 bp downstream