rs240322702 SNP Detail

Summary

• ID
  rs240322702
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:23475558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAAACATG GAAAACCTTT
  CTTTTCTCTC CATTCTTATG CCCTTTCGTT TTAGTACGTT TGTACCTTAA ACTGGTTGTC
  TTTTTTTTTT TTTTTTTTTT CTCTCTGACT CGTTTATACT TCATCATGGT TCAAGTATCT
  TAGGTAGTCT TCTGTAATGT GTAGGTCACA TATGTACCAC CTCTTGTTCT TTAGCTGCCT
  C
  CATCCTTCTC AGTTACACTC CTTAGTCCTT GCACATGTGG TATTTACAAG AGAATACATA
  GGAGCAGGCC AAAGAAATGA AGGAATCACT CAGATAACCC CTGAAAAGAT CCCAAGGGTC
  TATGTATTTC AGGGTCCCCA ACTGCAGAAT AGAAGTGACA GTAATTTTCC TGCCTACCTC
  ACAGGGCTGT TGTGAGGGCA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324891326	CHEV_15_23405227	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240322702					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:23475558 () rs orientation: forward

Symbol	Name	Function Class
Cdh18	cadherin 18	1054 bp downstream
Cpgi6966	CpG island 6966	1252 bp distal
Gm56739	predicted gene, 56739	737 bp downstream
Tssr130794	transcription start site region 130794	1014 bp downstream