rs240351482 SNP Detail

Summary

• ID
  rs240351482
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:74367213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAATGTTAA GCGGCTTCAG
  GAGTCTTGTG GACAGCACCA TCACCTAGGA CAGTAGGGGC AAGCACAGGA CAGTTAGAGA
  AATCAGTTAC CAGGGGTAAA GGAAGGTCTC CGAGGGAGGC AAGGCATGAA TGGTGTGGAG
  AAAAGCAGAC AGGACTCAGG GTCCCTCATC TATGACCTGG GTCCTAAGTG AGGCTCATGC
  Y
  CGATCACCTA GCCCATGAGC CTTTGGGTCC AACCGGCTGA CTCTGGGCAA CTCTTCCCAC
  AGCCTGGAGT GCAGCGTGAG GCTCATTTTC CTCTAGAACA CCAAGAGAGC TTGTTCCAGG
  ACTTGCCTGG GTACGTGATA CGTAAGGGCC AGGTGAGGGT CTGCCCAAGC AGGCACTAGG
  CATCTCTTGC TAACAAACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321569528	CHEV_5_74602577	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240351482					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:74367213 () rs orientation: forward

Symbol	Name	Function Class
Rr613253	regulatory region 613253	within coordinates
Rr613254	regulatory region 613254	1828 bp proximal
Scfd2	Sec1 family domain containing 2	within coordinates