rs240414453 SNP Detail

Summary

• ID
  rs240414453
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82272232 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGAAGTGAC CTGGGGAGGG
  GTTGCAGTAG TGGCTGCACA CTGGGAATGA CTTGCAGCCC TGAGCTATAA GAGAGGATGA
  CCTGGGAGTG GCTCACTGGA GCTCGCTGCC TGAGCATAGG CCTTGGGGTC CCCCACACCA
  GGAGAAATAA AATGTTAATG CTGGTGAATA TTAGTGATGC TGACCAAAAT AAAACAAAAA
  M
  GACGCTCAGA CAAACTCATC AATCTGCCTG GTATGGCAAG GAGTGTGGCC AGGGCTGAAG
  AGCAACCTCA GCTTGGGGAG TTCTGTCCTA CACAGTCCAG GACATGGTGC TTGAGTCCTG
  TCAGGCTGTG AGACCTTGAC TGAGAGCCTG GGACATGCTG ACAGCAGTGT CTCCTTACAG
  CTGGGGCTGA GGGCTATGTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CZECHII/EiJ	JF1/MsJ	LP/J	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	PWK/PhJ	RF/J	SJL/J	SM/J	SPRET/EiJ	SWR/J	WSB/EiJ
ss394739842	MGP_WTSI_15_82218461	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	A	C	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CZECHII/EiJ	JF1/MsJ	LP/J	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	PWK/PhJ	RF/J	SJL/J	SM/J	SPRET/EiJ	SWR/J	WSB/EiJ
rs240414453					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	A	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss394739842	MGP_WTSI_15_82218461	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82272232 () rs orientation: forward

Symbol	Name	Function Class
Cyp2d11	cytochrome P450, family 2, subfamily d, polypeptide 11	1123 bp downstream