rs240464514 SNP Detail

Summary

• ID
  rs240464514
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106105436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAGCTAAT TTTCTGCTCC
  TCTCTAACAA CTGATTTTCA TATTGTGACT TTCGGTTATC AAGTATTTCT TGGCTTTTTT
  TAAGACTGAT ATGTTCATTG CATTTCCGTC TGGTGTCTGA AATAAGTGTG TCTTTAAGGA
  TTTGTAGCTT GTGTTCAAAA TTTGTTTTCC ACTGAAACAA TATTTCACTA TCTGGGTCTT
  Y
  TTCAAAATAT TTGTCAAATT GTTCTTTGAT GGTTTCATAT TTCTTGCTAA GTGGATCCTC
  CAGTAAATTA GATGTGAGTG TCAGGATTTT ACCATTTTGA ATCTGAATGT TCAGCTGATT
  GTCTAAGTCC AGTACATGAC TCCTTAGCTC CCAGATCCAT TGACTATACA TGGTTTCCAG
  TTTGCTCATG GCTATGACCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322371913	CHEV_7_113649743	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240464514					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106105436 () rs orientation: forward

Symbol	Name	Function Class
Gm72977	predicted gene, 72977	within coordinates
Gvin-ps7	GTPase, very large interferon inducible, pseudogene 7	within coordinates
Tssr74127	transcription start site region 74127	1885 bp upstream
Tssr74128	transcription start site region 74128	1805 bp upstream
Tssr74129	transcription start site region 74129	1274 bp upstream
Tssr74130	transcription start site region 74130	1225 bp upstream
Tssr74131	transcription start site region 74131	1014 bp upstream
Tssr74132	transcription start site region 74132	838 bp upstream
Tssr74133	transcription start site region 74133	181 bp upstream
Tssr74134	transcription start site region 74134	38 bp downstream
Tssr74135	transcription start site region 74135	121 bp downstream
Tssr74136	transcription start site region 74136	189 bp downstream
Tssr74137	transcription start site region 74137	255 bp downstream
Tssr74138	transcription start site region 74138	285 bp downstream
Tssr74139	transcription start site region 74139	319 bp downstream
Tssr74140	transcription start site region 74140	374 bp downstream
Tssr74141	transcription start site region 74141	774 bp downstream
Tssr74142	transcription start site region 74142	917 bp downstream