rs240503112 SNP Detail

Summary

• ID
  rs240503112
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31220945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACCTTCGG AAGAGCAGTC
  AGTGCTCTTA ACTGCTGAGC CATCTTTAGA GCCCCAGGCA TTTTCTTAAT TAGTGATGGA
  TGGGAGAGGA CCCAGCCCAC TGTGGGTGGT GCTGTGCCTA GGCTGGCAGT CCTGGGTTCT
  ATAAGAATGC AGGCTGAGGA AGCCAAGTGG AGCACACCAG TAAGCAGTGC TCCTATATGG
  Y
  CTCATTATCA ACTCCTGGCT CCAGGTTCTC ATTTGAGTTG AGTTCTCGAT CCGGCTTCCC
  TCCGTGAACT GTGACTCTGG GTACGTAAGC CAAACAAACC CTTTCCTTCT CAAGTTGCTT
  TTGGTCATGA CTGTTCATTG CCACAATAGA AATCCTAGCT AAAACGATCA GAGTTAGAAA
  GCTGGAGTTA GTATACCAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325358244	CHEV_17_31138916	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240503112					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31220945 () rs orientation: forward

Symbol	Name	Function Class
Tssr143635	transcription start site region 143635	29 bp downstream
Umodl1	uromodulin-like 1	within coordinates