rs240506831 SNP Detail

Summary

• ID
  rs240506831
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129839931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGACAGGTAA GTGCCCTGAC
  TTTAGTGACA AAAAAAAAAA GCTAATTTGG GTACATGTTT TTGACCCATC CTTGCTTGGC
  ATTTTTCCAG TTTGGACAAG TGAAGCAGCC TTGTTCCAAG CTTTTAACCT TAAGGTAAAA
  AGAACATCAG AGACTGTGTA ATCTGACTTA GCAAGATTAG TGATTCTTCT CTTTCCCTCA
  W
  ATGACCGGTT ATTCTAACTC AATCGTGAAC TGGTCTAGTA ATAATTTCAG TATTAGAGTA
  TCCCAGGGAA GATAGCAAAA TATTCTTAAT TACTTACAAA GTTACATTAG AACACAGCCT
  CCTCTCCCAG AAAGATTGCA GCCTTTCTGT GATTCTCAAG GTCACCGCCC CCACACCTGG
  AGCTCTAAGT CTAAGCTTGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323543549	CHEV_10_129441118	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240506831					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129839931 () rs orientation: forward

Symbol	Name	Function Class
Rr385497	regulatory region 385497	within coordinates
Tssr96487	transcription start site region 96487	294 bp upstream