rs240551226 SNP Detail

Summary

• ID
  rs240551226
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141388883 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTGCCAAG GCTTAGTGAG
  GGCCTCCCAG TCTCTACCAA CACAGAGTCT TCTGGAAGAC AACGGCTGCT GTTTAAAAGG
  TTCCTTGTGT GTTGGTGCAG GGAGACACGC ACACAGGCAT GCAGCGCTGG TGTACAGGCG
  GTAGTTAGCC ACTCAGCTTA GGAGCTAGGA CCCTGACTTA GATTCTCTGG AAAAGAGGCC
  G
  GTGCTCTTAG CCACTGACCT GGCTATCTGT CCAGCAGCAT TTTTTTTTGT TTTGTTTTGT
  TTTGAATTTA CTTTTTCCAT CGTGAGTTCT GGAGATTGAA CCCAAGTCAT CCAGTTTGCA
  CACCAACTCT GGCTTGCAAG CCAGTTTCCC TGCTTTGGCC ATCTTACCAG GTCTGCCATG
  GCTGCTTCAG CCTCGGTGTC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321388824	CHEV_4_141217487	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240551226					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141388883 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15240	CpG island 15240	1612 bp proximal
Gm70264	predicted gene, 70264	534 bp upstream
Plekhm2	pleckstrin homology domain containing, family M (with RUN domain) member 2	within coordinates
Rr603849	regulatory region 603849	1618 bp distal