rs240577627 SNP Detail

Summary

• ID
  rs240577627
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99140109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTAGCAGGC ATCTACTACT
  CAGTCACATT CCAATAGGTT GTAAGACCAT TAACCAAAGG TCATAAAAAG GGAACTAGTG
  ATTTACTATA GGTGCTAGGA CAGAAGATAA AATATTGACT GAGTTTATCT ATACAAGACT
  TCACTAATAT CTTGGTAACA AAAGTTATGG TCCATGAACC TGCAGAGCTG GTGACAGGTG
  R
  TATACTCCTA ATGGATATGC ATGTAAACAT CCTCTGTTGT AAACTTATTC GATTTTATTT
  TGAATTTATG TGTAAACTTG TAGTGAACTT TTTACCATGT GATCATGTAT TCTGAAAGAT
  GTATAAGTAC TGAGGACAAA GAGGAGACAG AAGTAAACAC AGGAACTTGG AAGTAAAGGC
  ACTGGGAGTA AGAGCATTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135169	CHEV_9_99158475	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240577627					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99140109 () rs orientation: forward

Symbol	Name	Function Class
Cep70	centrosomal protein 70	within coordinates
Gm47199	predicted gene, 47199	1419 bp downstream
Rr383815	regulatory region 383815	306 bp downstream
Rr685374	regulatory region 685374	742 bp distal