rs240609704 SNP Detail

Summary

• ID
  rs240609704
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:24790736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCA GATGAGAGGC CGGGCTTCTC
  Y
  AAGCCTAGGT AACATTAGGT GGACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323275257	CHEV_10_24634644	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240609704					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:24790736 () rs orientation: forward

Symbol	Name	Function Class
Arg1	arginase, liver	369 bp downstream
Med23	mediator complex subunit 23	1378 bp downstream
Tssr92746	transcription start site region 92746	782 bp upstream
Tssr92747	transcription start site region 92747	855 bp upstream
Tssr97085	transcription start site region 97085	654 bp downstream
Tssr97086	transcription start site region 97086	700 bp downstream
Tssr97087	transcription start site region 97087	734 bp downstream
Tssr97088	transcription start site region 97088	792 bp downstream
Tssr97089	transcription start site region 97089	811 bp downstream
Tssr97090	transcription start site region 97090	842 bp downstream
Tssr97091	transcription start site region 97091	1233 bp downstream
Tssr97092	transcription start site region 97092	1253 bp downstream
Tssr97093	transcription start site region 97093	1277 bp downstream
Tssr97094	transcription start site region 97094	1293 bp downstream
Tssr97095	transcription start site region 97095	1307 bp downstream
Tssr97096	transcription start site region 97096	1572 bp downstream
Tssr97097	transcription start site region 97097	1846 bp downstream
Tssr97098	transcription start site region 97098	1994 bp downstream