rs240636063 SNP Detail

Summary

• ID
  rs240636063
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135872808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CATCTGTCA CTTTAAACAG CAAGACTCTC
  TCTATTCCAA CTGTAAGTCC TATAGCACCC CCTGGTGGCA TACCAGGAAC AGCCTGTGAT
  GGATGATAGT GTCCTAGGAA ACCCAAGGCA CCTCCTCCCA GCTTTGCCCA CAGCCTCTGC
  Y
  GTATCCTTCC TCTATTGTGG GGGGGTGGGG GGGGTCGTGA TAATGCGGTC TGGTCTGGCA
  ACTTTACACC AGCTTCAGAA AGCTCCTCCT TGATAGCAGA GAGCAGGTCC ACACTGCCCG
  AAGCCTGCGC GGCCCCAGGA TGAGGGATGG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319994060	CHEV_1_137841647	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240636063					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135872808 () rs orientation: forward

Symbol	Name	Function Class
Gm71005	predicted gene, 71005	within coordinates
Rr419321	regulatory region 419321	within coordinates
Rr419322	regulatory region 419322	78 bp distal
Rr419323	regulatory region 419323	567 bp proximal
Rr419324	regulatory region 419324	795 bp proximal