rs240648835 SNP Detail

Summary

• ID
  rs240648835
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:61426498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACCCATGT AAAGCCAAGT
  AATTAGTCGT CTCACAAGAA ACCCAAAAGA AGAAAACCAT ACAAACATAA ATCCACTTCT
  AACCACAAAA ATAACAGGAA CCAACAATCA TTTTGCTGCA TACAGGAAAC ATACCTCAGT
  GACAAAGACA GATACCACAT CAGAGAAAAA GGCCAGAAAA AAATTCTGAG CAAATGTTCC
  Y
  AAGAAACAAG CTGGAGTAGC AATTGTAATA TCAAATAAAA TCTACTTTCA ACCAAAATAT
  ATCAAAAAGA TGAGGAAAGA CACAACACAC ATCAAAGAAA ATAATGCACC AAGATGATTT
  TTTAATTCTG AATATCTATG CCCCAAATCC AAGGGCATTA ACATTCATAA AAAAAAACCA
  ACTCTACTAA AGCTCAAAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324063499	CHEV_12_62480699	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240648835					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:61426498 () rs orientation: forward

Symbol	Name	Function Class
Gm45964	predicted gene, 45964	within coordinates
Rr263931	regulatory region 263931	981 bp distal