rs240659951 SNP Detail

Summary

• ID
  rs240659951
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:8058847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGGTTTAT TGATGATACT GTTGAGTGGC
  TTAAAGCATT GTCTTTCAAA AATACCATTG AAGAACTAAA TAGATTGACT GACATGTTGG
  TGAAGAAGTT GAAAGCATTT GATTATCACC AGTTTGTAGA CAAAACCAAC AGCAAAATCC
  R
  TGAGATGACT CAGAGAATCA ATGCTGAAAT CCAAGCTCTC AAACTTCCAC AAAAAATGGA
  AGCATTAAAA CTGTTGGTAG AAGACTTCAA AACCACAGTC TCCAATTCCC TGGAAAGACT
  CAAGGACACC AAAGTAACTG TGGTCATTGA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323884665	CHEV_12_8015653	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240659951					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:8058847 () rs orientation: forward

Symbol	Name	Function Class
Apob	apolipoprotein B	Coding-NonSynonymous
Tssr3782	transcription start site region 3782	135 bp downstream
Tssr112634	transcription start site region 112634	1966 bp downstream
Tssr112635	transcription start site region 112635	1880 bp downstream
Tssr112636	transcription start site region 112636	1415 bp downstream
Tssr112637	transcription start site region 112637	1335 bp downstream
Tssr112638	transcription start site region 112638	1270 bp downstream
Tssr112639	transcription start site region 112639	1028 bp downstream
Tssr112640	transcription start site region 112640	986 bp downstream
Tssr112641	transcription start site region 112641	934 bp downstream
Tssr112642	transcription start site region 112642	860 bp downstream
Tssr112643	transcription start site region 112643	771 bp downstream
Tssr112644	transcription start site region 112644	557 bp downstream
Tssr112645	transcription start site region 112645	455 bp downstream
Tssr112646	transcription start site region 112646	426 bp downstream
Tssr112647	transcription start site region 112647	254 bp downstream
Tssr112648	transcription start site region 112648	232 bp downstream
Tssr112649	transcription start site region 112649	239 bp upstream
Tssr112650	transcription start site region 112650	298 bp upstream
Tssr112651	transcription start site region 112651	369 bp upstream
Tssr112652	transcription start site region 112652	393 bp upstream
Tssr112653	transcription start site region 112653	420 bp upstream
Tssr112654	transcription start site region 112654	436 bp upstream
Tssr112655	transcription start site region 112655	454 bp upstream
Tssr112656	transcription start site region 112656	476 bp upstream
Tssr112657	transcription start site region 112657	491 bp upstream
Tssr112658	transcription start site region 112658	524 bp upstream
Tssr112659	transcription start site region 112659	577 bp upstream
Tssr112660	transcription start site region 112660	729 bp upstream
Tssr112661	transcription start site region 112661	960 bp upstream
Tssr112662	transcription start site region 112662	1204 bp upstream
Tssr112663	transcription start site region 112663	1439 bp upstream
Tssr112664	transcription start site region 112664	1464 bp upstream
Tssr112665	transcription start site region 112665	1629 bp upstream
Tssr112666	transcription start site region 112666	1638 bp upstream
Tssr112667	transcription start site region 112667	1685 bp upstream
Tssr112668	transcription start site region 112668	1823 bp upstream
Tssr112669	transcription start site region 112669	1908 bp upstream
Tssr112670	transcription start site region 112670	1961 bp upstream