rs240670252 SNP Detail

Summary

• ID
  rs240670252
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99241786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCGGCTAG AACTCTTACT
  GCTCAAGCAG AGGACACTAA TTCAGGTCCC AGCACATACA AGAGGCTCGC CAAGTTCAAA
  TAACTCCAGC TCCAGGGGAT GGTCTTGGAT ACCACATTCA TACATATAAT TTTAAATTAA
  GAATAAATCT CCAAAAACTT ATTTATCAGA GTAAGGTTTT ACAACAATGG GAATGCTGCC
  R
  GAGGTCAGAA TACCTGAATC TCCTTCCTCT GCTCTTGGTC ATCTTCTTCT CAGGCTACCC
  TGGGATATCA ACCACAAAGC CCCTCCTTCC AAGTGCCTTT GAAGAGTCCG CTGCATTCAA
  ATCTTACTAA AGTTTCTGAG AAGTCCTACA GACAAAGGCT GGTAAACAGA ATTTAACCCT
  ATGTTGCTCT AATGATTCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135618	CHEV_9_99260152	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240670252					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99241786 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22193	CpG island 22193	1028 bp distal
Esyt3	extended synaptotagmin-like protein 3	1176 bp upstream
Tssr91051	transcription start site region 91051	1181 bp upstream