rs240705674 SNP Detail

Summary

• ID
  rs240705674
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118574154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAT TTGGGGAAGA ATAGGGAGAG
  R
  AATTGAATAA GAGCTTCAAG TACAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320471577	CHEV_2_118569409	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240705674					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118574154 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12091	CpG island 12091	1411 bp proximal
Rr397215	regulatory region 397215	1734 bp upstream
Rr563315	regulatory region 563315	within coordinates
Rr563316	regulatory region 563316	1595 bp proximal
Rr563317	regulatory region 563317	1826 bp proximal