rs240820946 SNP Detail

Summary

• ID
  rs240820946
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:44777579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCGCACTATG AAGTGCCACA
  CTATGCATCC CAATCCTGCC CCTGCCTCCA GAGCGCTGGG ACGGTTGCAG ATGCTCAACC
  TACAGCTGCA ATCTCCTTCC GAGAATCATC TGCCTTCTCA AGAAAGAGAC CTATGGATGG
  GGCTGGAGAT GAGGCTCAGT GGTAGAACAC TTGCCTAGAT ATGCAAGTTC CATCCAGACC
  W
  ACAAAGTAAT AATGAATAGC AATAGGAAGA GGAGGGAGAA GGAGGGGGAG GAGGAGGAGA
  AGAGGGAGGA GGAGGAGGAA CTGAGCATGA TAGCCCAGGC CTGCAATTCC AGACTGAGAG
  ACTGAGGGAG GAGATCCTCT CGTGCCACGC CAGCCTGGCC TCTGTAATAA GGCCCTCTGT
  CCACAAAATT AAAAAGAATT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324330194	CHEV_13_44719472	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240820946					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:44777579 () rs orientation: forward

Symbol	Name	Function Class
Gm40931	predicted gene, 40931	within coordinates
Gm47805	predicted gene, 47805	within coordinates
Rr283673	regulatory region 283673	within coordinates