rs240821820 SNP Detail

Summary

• ID
  rs240821820
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:5678378 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGCTTGCTG ATTTCTAGGA
  CAGCTCTCTG AAAAGTGTTG CATGCTGAAT TAATGGAACA ATTGGGTCTG CTGTTCTTTC
  TTATGAGCAC TGGTCCTGAC GTGTTATCAG TACAGCAGCC AACAATGCTA TTGCTCAGTA
  TATCCTTTCT TCCACACTCT CGTGGTCCCA ACCACTTTCC CACTCCACCC AAACACTACT
  W
  CTTTAGCACA GTACTCACAA AGATAGGAAG TGTTTGTCCT CATCACTCAG ACATCTATTT
  TTAAACTTGG GATTTTTCCA AGCCTTCCTA CTTCTTTGGT GATAATATTC CAAATAAATC
  TGTTCTTTCT TAATGGAATG TGATTTGGTA AAATTTAAGC AACATGAAAT AACCTTGACT
  AAAAACTAAA TGAATTTACT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324222374	CHEV_13_5627625	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240821820					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:5678378 () rs orientation: forward

Symbol	Name	Function Class
Rr284365	regulatory region 284365	within coordinates