rs240877179 SNP Detail

Summary

• ID
  rs240877179
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:10271161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTCATCC ATCTCTCTGT
  ATATCACTTT CTCTCTGTCT CTGTTTCTGC TTTTCTGCCT CTCTGTCTCT GTCTGCCTGC
  CTCTCTCTCT CTCTCTCTCT CTCTCTCTGT GTGTGTGTGT TTGTGTGTAT TGACAGGCCC
  ACCCTCTTCA ATATGTGTAC GGAGATCAGA GGACAACTTG TAGAAGTTAT TCTCCTTTCA
  Y
  AGTATAGGTT TTGAGAACTG AATTCAGTAC CCCAGGTTTG GCCACAAGTA CCTTTACCTA
  CTGAATGACC TCACCAGTGA GATCTATCAG TGTTCTGACA GAAGTTTTAG TATACAGTCC
  TGGCTAGACT GACACCCCCC ATAGAATCCA GGCTGGCCTG GAAGTCTTTC TGCCTCAGCT
  TCCATAGTGC TGGGATTCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324255810	CHEV_13_10220371	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240877179					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:10271161 () rs orientation: forward

Symbol	Name	Function Class
Chrm3	cholinergic receptor, muscarinic 3, cardiac	within coordinates
Rr281932	regulatory region 281932	446 bp distal